IL_6OM7_285
3D structure
- PDB id
- 6OM7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human ribosome nascent chain complex (PCSK9-RNC) stalled by a drug-like small molecule with AA and PE tRNAs
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GAGC*GCC
- Length
- 7 nucleotides
- Bulged bases
- 6OM7|1|t|A|2279
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6OM7_285 not in the Motif Atlas
- Geometric match to IL_3NJ7_004
- Geometric discrepancy: 0.2759
- The information below is about IL_3NJ7_004
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_42997.5
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 23
Unit IDs
6OM7|1|t|G|2278
6OM7|1|t|A|2279
6OM7|1|t|G|2280
6OM7|1|t|C|2281
*
6OM7|1|t|G|2312
6OM7|1|t|C|2313
6OM7|1|t|C|2314
Current chains
- Chain t
- 28S ribosomal RNA
Nearby chains
- Chain C
- 60S ribosomal protein L4
- Chain D
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain Z
- 60S ribosomal protein L26
- Chain f
- 60S ribosomal protein L32
- Chain r
- 60S ribosomal protein L28
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