IL_6ORD_320
3D structure
- PDB id
- 6ORD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CAG*CGGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ORD_320 not in the Motif Atlas
- Geometric match to IL_4V9F_080
- Geometric discrepancy: 0.195
- The information below is about IL_4V9F_080
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_61476.2
- Basepair signature
- cWW-tSH-L-cWW-L
- Number of instances in this motif group
- 7
Unit IDs
6ORD|1|YA|C|2297
6ORD|1|YA|A|2298
6ORD|1|YA|G|2299
*
6ORD|1|YA|C|2317
6ORD|1|YA|G|2318
6ORD|1|YA|G|2319
6ORD|1|YA|A|2320
6ORD|1|YA|G|2321
Current chains
- Chain YA
- 23S rRNA
Nearby chains
- Chain YB
- 5S ribosomal RNA; 5S rRNA
- Chain YG
- 50S ribosomal protein L5
- Chain YS
- 50S ribosomal protein L18
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