IL_6ORL_045
3D structure
- PDB id
- 6ORL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- RF1 pre-accommodated 70S complex at 24 ms
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCAACG*CGGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6ORL_045 not in the Motif Atlas
- Geometric match to IL_4V88_408
- Geometric discrepancy: 0.3791
- The information below is about IL_4V88_408
- Detailed Annotation
- C-loop with extra cWW pair
- Broad Annotation
- C-loop
- Motif group
- IL_11347.2
- Basepair signature
- cWW-cWW-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6ORL|1|1|C|1319
6ORL|1|1|C|1320
6ORL|1|1|A|1321
6ORL|1|1|A|1322
6ORL|1|1|C|1323
6ORL|1|1|G|1324
*
6ORL|1|1|C|1330
6ORL|1|1|G|1331
6ORL|1|1|G|1332
6ORL|1|1|G|1333
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain S
- 50S ribosomal protein L22
Coloring options: