IL_6OSI_035

3D structure

PDB id

6OSI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Unmodified tRNA(Pro) bound to Thermus thermophilus 70S (near cognate)

Experimental method

X-RAY DIFFRACTION

Resolution

4.14 Å

Loop

Sequence

CUGG*CUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSI_035 not in the Motif Atlas

Geometric match to IL_5EW4_002

Geometric discrepancy: 0.3181

The information below is about IL_5EW4_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

6OSI|1|QA|C|834
6OSI|1|QA|U|835
6OSI|1|QA|G|836
6OSI|1|QA|G|837
*
6OSI|1|QA|C|849
6OSI|1|QA|U|850
6OSI|1|QA|G|851
6OSI|1|QA|G|852

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QB

30S ribosomal protein S2

Chain QR

30S ribosomal protein S18