IL_6OSK_058

3D structure

PDB id

6OSK (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated 70S complex at 60 ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGAGG*CUGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSK_058 not in the Motif Atlas

Geometric match to IL_5J7L_063

Geometric discrepancy: 0.2854

The information below is about IL_5J7L_063

Detailed Annotation

Triple sheared related

Broad Annotation

Triple sheared

Motif group

IL_80231.1

Basepair signature

cWW-L-R-L-R-L-R-tHS-cWW

Number of instances in this motif group

2

Unit IDs

6OSK|1|1|C|1526
6OSK|1|1|G|1527
6OSK|1|1|A|1528
6OSK|1|1|G|1529
6OSK|1|1|G|1530
*
6OSK|1|1|C|1541
6OSK|1|1|U|1542
6OSK|1|1|G|1543
6OSK|1|1|A|1544
6OSK|1|1|A|1545
6OSK|1|1|G|1546

Current chains

Chain 1

23S ribosomal RNA

Nearby chains