3D structure

PDB id
6OSK (explore in PDB, NAKB, or RNA 3D Hub)
Description
RF1 accommodated 70S complex at 60 ms
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
UGAAAUCC*GAACUG
Length
14 nucleotides
Bulged bases
6OSK|1|2|U|632
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_6OSK_137 not in the Motif Atlas
Homologous match to IL_5J7L_030
Geometric discrepancy: 0.1488
The information below is about IL_5J7L_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_78349.3
Basepair signature
cWW-L-R-L-R-L-R-L-cWW-L-L
Number of instances in this motif group
2

Unit IDs

6OSK|1|2|U|605
6OSK|1|2|G|606
6OSK|1|2|A|607
6OSK|1|2|A|608
6OSK|1|2|A|609
6OSK|1|2|U|610
6OSK|1|2|C|611
6OSK|1|2|C|612
*
6OSK|1|2|G|628
6OSK|1|2|A|629
6OSK|1|2|A|630
6OSK|1|2|C|631
6OSK|1|2|U|632
6OSK|1|2|G|633

Current chains

Chain 2
16S ribosomal RNA

Nearby chains

Chain i
30S ribosomal protein S4
Chain m
30S ribosomal protein S8
Chain u
30S ribosomal protein S16
Chain v
30S ribosomal protein S17

Coloring options:


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