IL_6OSQ_191

3D structure

PDB id

6OSQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF1 accommodated state bound Release complex 70S at long incubation time point

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUAG*CGUAGAGA

Length

13 nucleotides

Bulged bases

6OSQ|1|2|A|702

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OSQ_191 not in the Motif Atlas

Homologous match to IL_5J7L_035

Geometric discrepancy: 0.1411

The information below is about IL_5J7L_035

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_01488.3

Basepair signature

cWW-tSS-tSH-L-R-tHS-L-cWW

Number of instances in this motif group

10

Unit IDs

6OSQ|1|2|U|684
6OSQ|1|2|G|685
6OSQ|1|2|U|686
6OSQ|1|2|A|687
6OSQ|1|2|G|688
*
6OSQ|1|2|C|699
6OSQ|1|2|G|700
6OSQ|1|2|U|701
6OSQ|1|2|A|702
6OSQ|1|2|G|703
6OSQ|1|2|A|704
6OSQ|1|2|G|705
6OSQ|1|2|A|706

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain p

30S ribosomal protein S11