IL_6OST_019

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OST_019 not in the Motif Atlas

Geometric match to IL_5J7L_263

Geometric discrepancy: 0.1141

The information below is about IL_5J7L_263

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

6OST|1|1|U|703
6OST|1|1|G|704
6OST|1|1|A|705
6OST|1|1|A|706
6OST|1|1|G|707
*
6OST|1|1|U|724
6OST|1|1|G|725
6OST|1|1|G|726
6OST|1|1|A|727
6OST|1|1|G|728

Current chains

Chain 1

23S Ribosomal RNA

Nearby chains

Chain B

50S ribosomal protein L2