IL_6OST_050

3D structure

PDB id

6OST (explore in PDB, NAKB, or RNA 3D Hub)

Description

RF2 pre-accommodated state bound Release complex 70S at 24ms

Experimental method

ELECTRON MICROSCOPY

Resolution

4.2 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

6OST|1|1|A|1420

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6OST_050 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.1461

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

6OST|1|1|C|1417
6OST|1|1|G|1418
6OST|1|1|A|1419
6OST|1|1|A|1420
6OST|1|1|G|1421
*
6OST|1|1|C|1577
6OST|1|1|U|1578
6OST|1|1|A|1579
6OST|1|1|A|1580
6OST|1|1|G|1581

Current chains

Chain 1

23S Ribosomal RNA

Nearby chains