IL_6PCQ_114

3D structure

PDB id

6PCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome bound to VM2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

6PCQ|1|I|U|846, 6PCQ|1|I|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6PCQ|1|I|A|844
6PCQ|1|I|A|845
6PCQ|1|I|U|846
6PCQ|1|I|U|847
6PCQ|1|I|C|848
*
6PCQ|1|I|G|930
6PCQ|1|I|U|931
6PCQ|1|I|U|932
6PCQ|1|I|A|933
6PCQ|1|I|U|934

Current chains

Chain I

23S ribosomal RNA

Nearby chains