IL_6QNR_112

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GCGAUG*CUAAGC

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_112 not in the Motif Atlas

Geometric match to IL_9AXU_113

Geometric discrepancy: 0.3131

The information below is about IL_9AXU_113

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74322.2

Basepair signature

cWW-tSH-L-R-L-R-L-R-cWW

Number of instances in this motif group

6

Unit IDs

6QNR|1|14|G|1416
6QNR|1|14|C|1417
6QNR|1|14|G|1418
6QNR|1|14|A|1419
6QNR|1|14|U|1420
6QNR|1|14|G|1421
*
6QNR|1|14|C|1577
6QNR|1|14|U|1578
6QNR|1|14|A|1579
6QNR|1|14|A|1580
6QNR|1|14|G|1581
6QNR|1|14|C|1582

Current chains

Chain 14

23S ribosomal RNA

Nearby chains