IL_6QNR_193
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGGCCAAC*GG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNR_193 not in the Motif Atlas
- Homologous match to IL_4LFB_020
- Geometric discrepancy: 0.1031
- The information below is about IL_4LFB_020
- Detailed Annotation
- SSU/LSU pseudoknot
- Broad Annotation
- No text annotation
- Motif group
- IL_11411.1
- Basepair signature
- cWW-L-cWW-L-L-R-cSH
- Number of instances in this motif group
- 12
Unit IDs
6QNR|1|1G|C|504
6QNR|1|1G|G|505
6QNR|1|1G|G|506
6QNR|1|1G|C|507
6QNR|1|1G|C|508
6QNR|1|1G|A|509
6QNR|1|1G|A|510
6QNR|1|1G|C|511
*
6QNR|1|1G|G|540
6QNR|1|1G|G|541
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 32
- 30S ribosomal protein S4
- Chain 3A
- 30S ribosomal protein S12
- Chain 42
- 30S ribosomal protein S5
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