IL_6QNR_258
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- UGUAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNR_258 not in the Motif Atlas
- Geometric match to IL_7RQB_027
- Geometric discrepancy: 0.1619
- The information below is about IL_7RQB_027
- Detailed Annotation
- 5x5 Sarcin-Ricin with intercalated A; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_38862.1
- Basepair signature
- cWW-L-R-tWH-tHS-cWW
- Number of instances in this motif group
- 4
Unit IDs
6QNR|1|1H|U|906
6QNR|1|1H|G|907
6QNR|1|1H|U|908
6QNR|1|1H|A|909
6QNR|1|1H|G|910
*
6QNR|1|1H|C|962
6QNR|1|1H|G|963
6QNR|1|1H|A|964
6QNR|1|1H|A|965
6QNR|1|1H|G|966
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 16
- 5S ribosomal RNA; 5S rRNA
- Chain 88
- 50S ribosomal protein L16
- Chain I8
- 50S ribosomal protein L27
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