IL_6QNR_269
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- GGUAAAG*CGAAAAUGAUCGGGGC
- Length
- 23 nucleotides
- Bulged bases
- 6QNR|1|1H|A|1174, 6QNR|1|1H|U|1177
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNR_269 not in the Motif Atlas
- Geometric match to IL_7RQB_040
- Geometric discrepancy: 0.3196
- The information below is about IL_7RQB_040
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_50715.1
- Basepair signature
- cWW-tSH-tHH-L-R-L-R-L-tWW-L-cWW-L-L-L-R-L
- Number of instances in this motif group
- 4
Unit IDs
6QNR|1|1H|G|1071
6QNR|1|1H|G|1072
6QNR|1|1H|U|1073
6QNR|1|1H|A|1074
6QNR|1|1H|A|1075
6QNR|1|1H|A|1076
6QNR|1|1H|G|1077
*
6QNR|1|1H|C|1171
6QNR|1|1H|G|1172
6QNR|1|1H|A|1173
6QNR|1|1H|A|1174
6QNR|1|1H|A|1175
6QNR|1|1H|A|1176
6QNR|1|1H|U|1177
6QNR|1|1H|G|1178
6QNR|1|1H|A|1179
6QNR|1|1H|U|1180
6QNR|1|1H|C|1181
6QNR|1|1H|G|1182
6QNR|1|1H|G|1183
6QNR|1|1H|G|1184
6QNR|1|1H|G|1185
6QNR|1|1H|C|1186
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 16
- 5S ribosomal RNA; 5S rRNA
- Chain 21
- 50S ribosomal protein L3
- Chain 58
- 50S ribosomal protein L13
- Chain 88
- 50S ribosomal protein L16
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