IL_6QNR_284

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

CGAUG*CUAAG

Length

10 nucleotides

Bulged bases

6QNR|1|1H|U|1467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_284 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.1368

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

6QNR|1|1H|C|1464
6QNR|1|1H|G|1465
6QNR|1|1H|A|1466
6QNR|1|1H|U|1467
6QNR|1|1H|G|1468
*
6QNR|1|1H|C|1625
6QNR|1|1H|U|1626
6QNR|1|1H|A|1627
6QNR|1|1H|A|1628
6QNR|1|1H|G|1629

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains