IL_6QNR_292

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGAAG*UGACAAC

Length

12 nucleotides

Bulged bases

6QNR|1|1H|C|1591

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_292 not in the Motif Atlas

Homologous match to IL_7RQB_063

Geometric discrepancy: 0.1703

The information below is about IL_7RQB_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_02656.1

Basepair signature

cWW-L-R-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

6QNR|1|1H|G|1573
6QNR|1|1H|G|1574
6QNR|1|1H|A|1575
6QNR|1|1H|A|1576
6QNR|1|1H|G|1577
*
6QNR|1|1H|U|1588
6QNR|1|1H|G|1589
6QNR|1|1H|A|1590
6QNR|1|1H|C|1591
6QNR|1|1H|A|1592
6QNR|1|1H|A|1593
6QNR|1|1H|C|1594

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains