IL_6QNR_303

3D structure

PDB id

6QNR (explore in PDB, NAKB, or RNA 3D Hub)

Description

70S ribosome elongation complex (EC) with experimentally assigned potassium ions

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UCAAG*CGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6QNR_303 not in the Motif Atlas

Homologous match to IL_7RQB_074

Geometric discrepancy: 0.1728

The information below is about IL_7RQB_074

Detailed Annotation

UAA/GAN with extra stack

Broad Annotation

No text annotation

Motif group

IL_90318.1

Basepair signature

cWW-tSH-L-R-L-R-cWW

Number of instances in this motif group

3

Unit IDs

6QNR|1|1H|U|1883
6QNR|1|1H|C|1884
6QNR|1|1H|A|1885
6QNR|1|1H|A|1886
6QNR|1|1H|G|1887
*
6QNR|1|1H|C|1910
6QNR|1|1H|G|1911
6QNR|1|1H|A|1912
6QNR|1|1H|A|1913
6QNR|1|1H|G|1914

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 11

50S ribosomal protein L2

Chain 3K

Transfer RNA; tRNA

Chain J8

50S ribosomal protein L28