IL_6QNR_397
3D structure
- PDB id
- 6QNR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 70S ribosome elongation complex (EC) with experimentally assigned potassium ions
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAAGACAG*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 6QNR|1|1H|A|1093
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QNR_397 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.2739
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
6QNR|1|1H|C|1090
6QNR|1|1H|G|1091
6QNR|1|1H|A|1092
6QNR|1|1H|A|1093
6QNR|1|1H|G|1094
6QNR|1|1H|A|1095
6QNR|1|1H|C|1096
6QNR|1|1H|A|1097
6QNR|1|1H|G|1098
*
6QNR|1|1H|U|1155
6QNR|1|1H|C|1156
6QNR|1|1H|G|1157
6QNR|1|1H|A|1158
6QNR|1|1H|G|1159
Current chains
- Chain 1H
- 23S ribosomal RNA
Nearby chains
- Chain 38
- 50S ribosomal protein L10
- Chain 51
- 50S ribosomal protein L6
Coloring options: