IL_6QTZ_033
3D structure
- PDB id
- 6QTZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GGG*UAAUC
- Length
- 8 nucleotides
- Bulged bases
- 6QTZ|1|A|G|908, 6QTZ|1|A|A|920, 6QTZ|1|A|A|921
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QTZ_033 not in the Motif Atlas
- Homologous match to IL_8C3A_036
- Geometric discrepancy: 0.1229
- The information below is about IL_8C3A_036
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_90991.8
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
6QTZ|1|A|G|907
6QTZ|1|A|G|908
6QTZ|1|A|G|909
*
6QTZ|1|A|U|919
6QTZ|1|A|A|920
6QTZ|1|A|A|921
6QTZ|1|A|U|922
6QTZ|1|A|C|923
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L2-A
- Chain O
- 60S ribosomal protein L15-A
- Chain U
- 60S ribosomal protein L17-A
- Chain i
- 60S ribosomal protein L37-A
- Chain z
- Cytoplasmic 60S subunit biogenesis factor REH1
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