IL_6QTZ_083
3D structure
- PDB id
- 6QTZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UG*UAAA
- Length
- 6 nucleotides
- Bulged bases
- 6QTZ|1|A|A|2242, 6QTZ|1|A|A|2243
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6QTZ_083 not in the Motif Atlas
- Homologous match to IL_8C3A_090
- Geometric discrepancy: 0.2166
- The information below is about IL_8C3A_090
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_82107.1
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 34
Unit IDs
6QTZ|1|A|U|2200
6QTZ|1|A|G|2201
*
6QTZ|1|A|U|2241
6QTZ|1|A|A|2242
6QTZ|1|A|A|2243
6QTZ|1|A|A|2244
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain B
- 60S ribosomal protein L2-A
- Chain w
- 60S ribosomal export protein NMD3
Coloring options: