IL_6R6G_101
3D structure
- PDB id
- 6R6G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of XBP1u-paused ribosome nascent chain complex with SRP.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- AACAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6R6G_101 not in the Motif Atlas
- Homologous match to IL_5TBW_074
- Geometric discrepancy: 0.1565
- The information below is about IL_5TBW_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6R6G|1|5|A|2225
6R6G|1|5|A|2226
6R6G|1|5|C|2227
6R6G|1|5|A|2228
6R6G|1|5|A|2229
6R6G|1|5|U|2230
6R6G|1|5|G|2231
*
6R6G|1|5|C|2548
6R6G|1|5|U|2549
6R6G|1|5|A|2550
6R6G|1|5|U|2551
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- uL3
- Chain P
- uL22
- Chain d
- eL31
Coloring options: