IL_6RM3_008
3D structure
- PDB id
- 6RM3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UUUAGUAG*UGAACAA
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6RM3_008 not in the Motif Atlas
- Homologous match to IL_5TBW_006
- Geometric discrepancy: 0.1592
- The information below is about IL_5TBW_006
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_88613.1
- Basepair signature
- cWW-L-R-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6RM3|1|L50|U|161
6RM3|1|L50|U|162
6RM3|1|L50|U|163
6RM3|1|L50|A|164
6RM3|1|L50|G|165
6RM3|1|L50|U|166
6RM3|1|L50|A|167
6RM3|1|L50|G|168
*
6RM3|1|L50|U|176
6RM3|1|L50|G|177
6RM3|1|L50|A|178
6RM3|1|L50|A|179
6RM3|1|L50|C|180
6RM3|1|L50|A|181
6RM3|1|L50|A|182
Current chains
- Chain L50
- 23S rRNA
Nearby chains
- Chain LAA
- uL15
- Chain LL0
- eL13
- Chain LN0
- eL15
- Chain LQ0
- eL18
Coloring options: