IL_6RM3_032

3D structure

PDB id

6RM3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Evolutionary compaction and adaptation visualized by the structure of the dormant microsporidian ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CAA*UGAG

Length

7 nucleotides

Bulged bases

6RM3|1|L50|G|1111

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6RM3_032 not in the Motif Atlas

Homologous match to IL_5TBW_057

Geometric discrepancy: 0.237

The information below is about IL_5TBW_057

Detailed Annotation

Isolated cWS basepair

Broad Annotation

Isolated cWS basepair

Motif group

IL_73554.3

Basepair signature

cWW-cWS-cWW

Number of instances in this motif group

10

Unit IDs

6RM3|1|L50|C|1060
6RM3|1|L50|A|1061
6RM3|1|L50|A|1062
*
6RM3|1|L50|U|1110
6RM3|1|L50|G|1111
6RM3|1|L50|A|1112
6RM3|1|L50|G|1113

Current chains

Chain L50

23S rRNA

Nearby chains

Chain LAA

uL15

Chain LC0

uL4

Chain LEE

eL32