IL_6S05_025
3D structure
- PDB id
- 6S05 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structures of Lsg1-TAP pre-60S ribosomal particles
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- AUC*GAUU
- Length
- 7 nucleotides
- Bulged bases
- 6S05|1|A|U|776
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S05_025 not in the Motif Atlas
- Geometric match to IL_5J7L_009
- Geometric discrepancy: 0.3023
- The information below is about IL_5J7L_009
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- Isolated non-canonical cWW pair
- Motif group
- IL_57744.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 22
Unit IDs
6S05|1|A|A|755
6S05|1|A|U|756
6S05|1|A|C|757
*
6S05|1|A|G|774
6S05|1|A|A|775
6S05|1|A|U|776
6S05|1|A|U|777
Current chains
- Chain A
- 25S ribosomal RNA
Nearby chains
- Chain K
- 60S ribosomal protein L13-A
- Chain Q
- 60S ribosomal protein L18-A
- Chain a
- 60S ribosomal protein L29
- Chain l
- 60S ribosomal protein L42-A
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