IL_6S0X_006
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- CUUAGUAG*CGAAAUG
- Length
- 15 nucleotides
- Bulged bases
- 6S0X|1|A|U|242
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S0X_006 not in the Motif Atlas
- Homologous match to IL_7A0S_007
- Geometric discrepancy: 0.4002
- The information below is about IL_7A0S_007
- Detailed Annotation
- 8x7 Sarcin-Ricin; G-bulge
- Broad Annotation
- Sarcin-Ricin; G-bulge
- Motif group
- IL_04346.10
- Basepair signature
- cWW-cWW-tSH-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 15
Unit IDs
6S0X|1|A|C|241
6S0X|1|A|U|242
6S0X|1|A|U|243
6S0X|1|A|A|244
6S0X|1|A|G|245
6S0X|1|A|U|246
6S0X|1|A|A|247
6S0X|1|A|G|248
*
6S0X|1|A|C|256
6S0X|1|A|G|257
6S0X|1|A|A|258
6S0X|1|A|A|259
6S0X|1|A|A|260
6S0X|1|A|U|261
6S0X|1|A|G|262
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain J
- 50S ribosomal protein L15
Coloring options: