IL_6S0X_083
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- UUGAG*CAAGAUGAG
- Length
- 14 nucleotides
- Bulged bases
- 6S0X|1|A|A|2803, 6S0X|1|A|G|2804, 6S0X|1|A|U|2806, 6S0X|1|A|G|2807, 6S0X|1|A|A|2808
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S0X_083 not in the Motif Atlas
- Homologous match to IL_7RQB_102
- Geometric discrepancy: 0.5921
- The information below is about IL_7RQB_102
- Detailed Annotation
- tSH-tHS-tHW
- Broad Annotation
- tSH-tHS-tHW
- Motif group
- IL_04638.1
- Basepair signature
- cWW-tSH-tHW-tHS-cSH-cWW-L
- Number of instances in this motif group
- 5
Unit IDs
6S0X|1|A|U|2663
6S0X|1|A|U|2664
6S0X|1|A|G|2665
6S0X|1|A|A|2666
6S0X|1|A|G|2667
*
6S0X|1|A|C|2801
6S0X|1|A|A|2802
6S0X|1|A|A|2803
6S0X|1|A|G|2804
6S0X|1|A|A|2805
6S0X|1|A|U|2806
6S0X|1|A|G|2807
6S0X|1|A|A|2808
6S0X|1|A|G|2809
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain H
- 50S ribosomal protein L13
Coloring options: