IL_6S0X_125
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- UGUGUAG*CGCAGAGAUA
- Length
- 17 nucleotides
- Bulged bases
- 6S0X|1|a|A|710
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S0X_125 not in the Motif Atlas
- Geometric match to IL_8CRE_436
- Geometric discrepancy: 0.3962
- The information below is about IL_8CRE_436
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_89047.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-L-cWH-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
6S0X|1|a|U|690
6S0X|1|a|G|691
6S0X|1|a|U|692
6S0X|1|a|G|693
6S0X|1|a|U|694
6S0X|1|a|A|695
6S0X|1|a|G|696
*
6S0X|1|a|C|707
6S0X|1|a|G|708
6S0X|1|a|C|709
6S0X|1|a|A|710
6S0X|1|a|G|711
6S0X|1|a|A|712
6S0X|1|a|G|713
6S0X|1|a|A|714
6S0X|1|a|U|715
6S0X|1|a|A|716
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain k
- 30S ribosomal protein S11
Coloring options: