IL_6S0X_136
3D structure
- PDB id
- 6S0X (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- GUGCAU*AUGC
- Length
- 10 nucleotides
- Bulged bases
- 6S0X|1|a|C|1065
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S0X_136 not in the Motif Atlas
- Homologous match to IL_5J7L_362
- Geometric discrepancy: 0.4311
- The information below is about IL_5J7L_362
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49612.1
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
6S0X|1|a|G|1062
6S0X|1|a|U|1063
6S0X|1|a|G|1064
6S0X|1|a|C|1065
6S0X|1|a|A|1066
6S0X|1|a|U|1067
*
6S0X|1|a|A|1214
6S0X|1|a|U|1215
6S0X|1|a|G|1216
6S0X|1|a|C|1217
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14 type Z
- Chain v
- Ribosome hibernation promoting factor
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