IL_6S0X_163

3D structure

PDB id

6S0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22) in complex with erythromycin.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

UAG*CACA

Length

7 nucleotides

Bulged bases

6S0X|1|A|C|1606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6S0X_163 not in the Motif Atlas

Homologous match to IL_7A0S_052

Geometric discrepancy: 0.4397

The information below is about IL_7A0S_052

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38565.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

12

Unit IDs

6S0X|1|A|U|1477
6S0X|1|A|A|1478
6S0X|1|A|G|1479
*
6S0X|1|A|C|1604
6S0X|1|A|A|1605
6S0X|1|A|C|1606
6S0X|1|A|A|1607

Current chains

Chain A

23S ribosomal RNA

Nearby chains