IL_6S12_104
3D structure
- PDB id
- 6S12 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 50S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGGAAG*UGGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S12_104 not in the Motif Atlas
- Homologous match to IL_4WF9_108
- Geometric discrepancy: 0.1468
- The information below is about IL_4WF9_108
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_48489.1
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 8
Unit IDs
6S12|1|A|U|2867
6S12|1|A|G|2868
6S12|1|A|G|2869
6S12|1|A|A|2870
6S12|1|A|A|2871
6S12|1|A|G|2872
*
6S12|1|A|U|2885
6S12|1|A|G|2886
6S12|1|A|G|2887
6S12|1|A|A|2888
6S12|1|A|G|2889
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain L
- 50S ribosomal protein L17
- Chain N
- 50S ribosomal protein L19
Coloring options: