IL_6S13_049
3D structure
- PDB id
- 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.58 Å
Loop
- Sequence
- GGAAG*CGC
- Length
- 8 nucleotides
- Bulged bases
- 6S13|1|A|G|1369
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S13_049 not in the Motif Atlas
- Homologous match to IL_5J7L_291
- Geometric discrepancy: 0.3845
- The information below is about IL_5J7L_291
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
6S13|1|A|G|1356
6S13|1|A|G|1357
6S13|1|A|A|1358
6S13|1|A|A|1359
6S13|1|A|G|1360
*
6S13|1|A|C|1368
6S13|1|A|G|1369
6S13|1|A|C|1370
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain Q
- 50S ribosomal protein L22
Coloring options: