IL_6S13_072
3D structure
- PDB id
- 6S13 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Erythromycin Resistant Staphylococcus aureus 70S ribosome (delta R88 A89 uL22).
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.58 Å
Loop
- Sequence
- ACG*CUAU
- Length
- 7 nucleotides
- Bulged bases
- 6S13|1|A|C|2082, 6S13|1|A|U|2640
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6S13_072 not in the Motif Atlas
- Homologous match to IL_4WF9_079
- Geometric discrepancy: 0.1478
- The information below is about IL_4WF9_079
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_83389.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 5
Unit IDs
6S13|1|A|A|2081
6S13|1|A|C|2082
6S13|1|A|G|2083
*
6S13|1|A|C|2639
6S13|1|A|U|2640
6S13|1|A|A|2641
6S13|1|A|U|2642
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain Z
- 50S ribosomal protein L32
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