IL_6SJ6_060
3D structure
- PDB id
- 6SJ6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of 50S-RsfS complex from Staphylococcus aureus
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- UUC*GG
- Length
- 5 nucleotides
- Bulged bases
- 6SJ6|1|A|U|2429
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SJ6_060 not in the Motif Atlas
- Homologous match to IL_4WF9_088
- Geometric discrepancy: 0.3998
- The information below is about IL_4WF9_088
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
6SJ6|1|A|U|2428
6SJ6|1|A|U|2429
6SJ6|1|A|C|2430
*
6SJ6|1|A|G|2441
6SJ6|1|A|G|2442
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain O
- 50S ribosomal protein L15
Coloring options: