IL_6SPG_162
3D structure
- PDB id
- 6SPG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Pseudomonas aeruginosa 70s ribosome from a clinical isolate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- GUUG*CUAAUC
- Length
- 10 nucleotides
- Bulged bases
- 6SPG|1|a|U|1251, 6SPG|1|a|A|1274
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SPG_162 not in the Motif Atlas
- Homologous match to IL_4LFB_052
- Geometric discrepancy: 0.3229
- The information below is about IL_4LFB_052
- Detailed Annotation
- 180 degree turn
- Broad Annotation
- No text annotation
- Motif group
- IL_08849.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
6SPG|1|a|G|1249
6SPG|1|a|U|1250
6SPG|1|a|U|1251
6SPG|1|a|G|1252
*
6SPG|1|a|C|1271
6SPG|1|a|U|1272
6SPG|1|a|A|1273
6SPG|1|a|A|1274
6SPG|1|a|U|1275
6SPG|1|a|C|1276
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain c
- 30S ribosomal protein S3
- Chain j
- 30S ribosomal protein S10
- Chain n
- 30S ribosomal protein S14
Coloring options: