IL_6SWA_097
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AACAAUG*CUAU
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SWA_097 not in the Motif Atlas
- Homologous match to IL_5TBW_074
- Geometric discrepancy: 0.1361
- The information below is about IL_5TBW_074
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_49460.3
- Basepair signature
- cWW-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 3
Unit IDs
6SWA|1|q|A|2811
6SWA|1|q|A|2812
6SWA|1|q|C|2813
6SWA|1|q|A|2814
6SWA|1|q|A|2815
6SWA|1|q|U|2816
6SWA|1|q|G|2817
*
6SWA|1|q|C|3821
6SWA|1|q|U|3822
6SWA|1|q|A|3823
6SWA|1|q|U|3824
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain O
- 60S ribosomal protein L17
- Chain b
- 60S ribosomal protein L31
Coloring options: