IL_6SWA_140
3D structure
- PDB id
- 6SWA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mus musculus 80S ribosome bound to the peptide tunnel exit chaperone EBP1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACAUUU*ACCAU
- Length
- 11 nucleotides
- Bulged bases
- 6SWA|1|q|C|4632
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6SWA_140 not in the Motif Atlas
- Geometric match to IL_5TBW_062
- Geometric discrepancy: 0.3838
- The information below is about IL_5TBW_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51005.1
- Basepair signature
- cWW-L-R-tWH-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6SWA|1|q|A|4586
6SWA|1|q|C|4587
6SWA|1|q|A|4588
6SWA|1|q|U|4589
6SWA|1|q|U|4590
6SWA|1|q|U|4591
*
6SWA|1|q|A|4631
6SWA|1|q|C|4632
6SWA|1|q|C|4633
6SWA|1|q|A|4634
6SWA|1|q|U|4635
Current chains
- Chain q
- 28S ribosomal RNA (3612-MER)
Nearby chains
- Chain B
- 60S ribosomal protein L3
- Chain T
- 60S ribosomal protein L23
- Chain U
- 60S ribosomal protein L24
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