3D structure

PDB id
6T59 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
CGAAU*AAAUGUG
Length
12 nucleotides
Bulged bases
6T59|1|54|G|119, 6T59|1|54|U|150
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6T59|1|54|C|118
6T59|1|54|G|119
6T59|1|54|A|120
6T59|1|54|A|121
6T59|1|54|U|122
*
6T59|1|54|A|147
6T59|1|54|A|148
6T59|1|54|A|149
6T59|1|54|U|150
6T59|1|54|G|151
6T59|1|54|U|152
6T59|1|54|G|153

Current chains

Chain 54
28S ribosomal RNA

Nearby chains

Chain 84
5.8S ribosomal RNA; 5.8S rRNA
Chain G3
eL8
Chain N3
Ribosomal protein L15
Chain h3
uL29

Coloring options:

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