3D structure

PDB id
6T59 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
Experimental method
ELECTRON MICROSCOPY
Resolution
3.11 Å

Loop

Sequence
CAUUG*CCAAGCG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6T59|1|54|C|4466
6T59|1|54|A|4467
6T59|1|54|U|4468
6T59|1|54|U|4469
6T59|1|54|G|4470
*
6T59|1|54|C|4485
6T59|1|54|C|4486
6T59|1|54|A|4487
6T59|1|54|A|4488
6T59|1|54|G|4489
6T59|1|54|C|4490
6T59|1|54|G|4491

Current chains

Chain 54
28S ribosomal RNA

Nearby chains

Chain B3
uL3
Chain H3
uL6
Chain O3
uL13
Chain V3
Ribosomal protein L23
Chain m3
eL40

Coloring options:

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