IL_6T59_177
3D structure
- PDB id
- 6T59 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of rabbit 80S ribosome translating beta-tubulin in complex with tetratricopeptide protein 5 and nascent chain-associated complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.11 Å
Loop
- Sequence
- UAA*UCGA
- Length
- 7 nucleotides
- Bulged bases
- 6T59|1|84|G|94
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T59_177 not in the Motif Atlas
- Homologous match to IL_8P9A_371
- Geometric discrepancy: 0.1568
- The information below is about IL_8P9A_371
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_76400.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
6T59|1|84|U|64
6T59|1|84|A|65
6T59|1|84|A|66
*
6T59|1|84|U|92
6T59|1|84|C|93
6T59|1|84|G|94
6T59|1|84|A|95
Current chains
- Chain 84
- 5.8S ribosomal RNA
Nearby chains
- Chain 54
- Large subunit ribosomal RNA; LSU rRNA
- Chain Y3
- Ribosomal protein L26
- Chain h3
- uL29
- Chain j3
- Ribosomal protein L37
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