IL_6T7T_061
3D structure
- PDB id
- 6T7T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast 80S ribosome stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUCAAC*GGAC
- Length
- 10 nucleotides
- Bulged bases
- 6T7T|1|C1|G|1514
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T7T_061 not in the Motif Atlas
- Geometric match to IL_5TBW_062
- Geometric discrepancy: 0.122
- The information below is about IL_5TBW_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_51005.1
- Basepair signature
- cWW-L-R-tWH-cWW-L-L
- Number of instances in this motif group
- 2
Unit IDs
6T7T|1|C1|G|1500
6T7T|1|C1|U|1501
6T7T|1|C1|C|1502
6T7T|1|C1|A|1503
6T7T|1|C1|A|1504
6T7T|1|C1|C|1505
*
6T7T|1|C1|G|1513
6T7T|1|C1|G|1514
6T7T|1|C1|A|1515
6T7T|1|C1|C|1516
Current chains
- Chain C1
- 25S rRNA
Nearby chains
- Chain LP
- 60S ribosomal protein L17-A
- Chain LR
- 60S ribosomal protein L19-A
- Chain Ll
- 60S ribosomal protein L39
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