IL_6T83_097
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CAU*AGUAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_097 not in the Motif Atlas
- Homologous match to IL_5TBW_099
- Geometric discrepancy: 0.2193
- The information below is about IL_5TBW_099
- Detailed Annotation
- Isolated tHS basepair with bulges
- Broad Annotation
- No text annotation
- Motif group
- IL_71241.2
- Basepair signature
- cWW-cWW-tSH-cWW-L-L
- Number of instances in this motif group
- 7
Unit IDs
6T83|1|1b|C|2666
6T83|1|1b|A|2667
6T83|1|1b|U|2668
*
6T83|1|1b|A|2686
6T83|1|1b|G|2687
6T83|1|1b|U|2688
6T83|1|1b|A|2689
6T83|1|1b|G|2690
Current chains
- Chain 1b
- 25S rRNA
Nearby chains
- Chain 4b
- 5S ribosomal RNA; 5S rRNA
- Chain Dy
- 60S ribosomal protein L5
- Chain Jy
- 60S ribosomal protein L11-A
- Chain Ty
- 60S ribosomal protein L21-A
Coloring options: