IL_6T83_303

3D structure

PDB id

6T83 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of yeast disome (di-ribosome) stalled on poly(A) tract.

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

UCUUC*GGAAUA

Length

11 nucleotides

Bulged bases

6T83|1|Aa|U|1629, 6T83|1|Aa|U|1815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6T83_303 not in the Motif Atlas

Homologous match to IL_8C3A_072

Geometric discrepancy: 0.1978

The information below is about IL_8C3A_072

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_48431.1

Basepair signature

cWW-L-R-L-R-L-cWW

Number of instances in this motif group

2

Unit IDs

6T83|1|Aa|U|1627
6T83|1|Aa|C|1628
6T83|1|Aa|U|1629
6T83|1|Aa|U|1630
6T83|1|Aa|C|1631
*
6T83|1|Aa|G|1811
6T83|1|Aa|G|1812
6T83|1|Aa|A|1813
6T83|1|Aa|A|1814
6T83|1|Aa|U|1815
6T83|1|Aa|A|1816

Current chains

Chain Aa

25S rRNA

Nearby chains

Chain K

60S ribosomal protein L27-A