IL_6T83_399
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- UAUCAA*UUUCAACG
- Length
- 14 nucleotides
- Bulged bases
- 6T83|1|a|U|313, 6T83|1|a|C|351
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_399 not in the Motif Atlas
- Homologous match to IL_4V88_402
- Geometric discrepancy: 0.1453
- The information below is about IL_4V88_402
- Detailed Annotation
- Kink-turn with non-sequential stacking
- Broad Annotation
- Kink-turn
- Motif group
- IL_45067.5
- Basepair signature
- cWW-tSH-tSS-tHS-R-cWW-cWW-R
- Number of instances in this motif group
- 16
Unit IDs
6T83|1|a|U|311
6T83|1|a|A|312
6T83|1|a|U|313
6T83|1|a|C|314
6T83|1|a|A|315
6T83|1|a|A|316
*
6T83|1|a|U|348
6T83|1|a|U|349
6T83|1|a|U|350
6T83|1|a|C|351
6T83|1|a|A|352
6T83|1|a|A|353
6T83|1|a|C|354
6T83|1|a|G|355
Current chains
- Chain a
- 18S rRNA
Nearby chains
- Chain j
- 40S ribosomal protein S8-A
- Chain m
- 40S ribosomal protein S11-A
- Chain y
- 40S ribosomal protein S23-A
Coloring options: