IL_6T83_468
3D structure
- PDB id
- 6T83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of yeast disome (di-ribosome) stalled on poly(A) tract.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GGGGC*GUGCAC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6T83_468 not in the Motif Atlas
- Geometric match to IL_5J7L_063
- Geometric discrepancy: 0.2928
- The information below is about IL_5J7L_063
- Detailed Annotation
- Triple sheared related
- Broad Annotation
- Triple sheared
- Motif group
- IL_80231.1
- Basepair signature
- cWW-L-R-L-R-L-R-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
6T83|1|1b|G|725
6T83|1|1b|G|726
6T83|1|1b|G|727
6T83|1|1b|G|728
6T83|1|1b|C|729
*
6T83|1|1b|G|740
6T83|1|1b|U|741
6T83|1|1b|G|742
6T83|1|1b|C|743
6T83|1|1b|A|744
6T83|1|1b|C|745
Current chains
- Chain 1b
- 25S rRNA
Nearby chains
- Chain Qy
- 60S ribosomal protein L18-A
- Chain by
- 60S ribosomal protein L29
Coloring options: