IL_6TH6_120
3D structure
- PDB id
- 6TH6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM Structure of T. kodakarensis 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.55 Å
Loop
- Sequence
- CUAAC*GGAAAG
- Length
- 11 nucleotides
- Bulged bases
- 6TH6|1|BA|A|1516, 6TH6|1|BA|A|1517
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6TH6_120 not in the Motif Atlas
- Geometric match to IL_5TBW_063
- Geometric discrepancy: 0.1172
- The information below is about IL_5TBW_063
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_89002.4
- Basepair signature
- cWW-tWH-cWW-L-cWW-tHS
- Number of instances in this motif group
- 15
Unit IDs
6TH6|1|BA|C|1486
6TH6|1|BA|U|1487
6TH6|1|BA|A|1488
6TH6|1|BA|A|1489
6TH6|1|BA|C|1490
*
6TH6|1|BA|G|1513
6TH6|1|BA|G|1514
6TH6|1|BA|A|1515
6TH6|1|BA|A|1516
6TH6|1|BA|A|1517
6TH6|1|BA|G|1518
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BC
- 50S ribosomal protein L2
- Chain Be
- 50S ribosomal protein L34e
- Chain Bh
- 50S ribosomal protein L37e
- Chain Bi
- 50S ribosomal protein L39e
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