IL_6U48_022

3D structure

PDB id

6U48 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S with phazolicin (PHZ) bound in exit tunnel

Experimental method

ELECTRON MICROSCOPY

Resolution

2.87 Å

Loop

Sequence

AAUU*AU

Length

6 nucleotides

Bulged bases

6U48|1|CA|U|846

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6U48_022 not in the Motif Atlas

Homologous match to IL_5J7L_267

Geometric discrepancy: 0.15

The information below is about IL_5J7L_267

Detailed Annotation

90 degree turn

Broad Annotation

90 degree turn

Motif group

IL_90729.1

Basepair signature

cWW-L-cWW

Number of instances in this motif group

30

Unit IDs

6U48|1|CA|A|844
6U48|1|CA|A|845
6U48|1|CA|U|846
6U48|1|CA|U|847
*
6U48|1|CA|A|933
6U48|1|CA|U|934

Current chains

Chain CA

23S rRNA

Nearby chains

Chain C0

50S ribosomal protein uL30