IL_6U48_031
3D structure
- PDB id
- 6U48 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 50S with phazolicin (PHZ) bound in exit tunnel
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.87 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 6U48|1|CA|A|1156
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6U48_031 not in the Motif Atlas
- Homologous match to IL_4WF9_036
- Geometric discrepancy: 0.0671
- The information below is about IL_4WF9_036
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.1
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 22
Unit IDs
6U48|1|CA|C|998
6U48|1|CA|U|999
6U48|1|CA|A|1000
6U48|1|CA|A|1001
6U48|1|CA|G|1002
*
6U48|1|CA|C|1153
6U48|1|CA|G|1154
6U48|1|CA|A|1155
6U48|1|CA|A|1156
6U48|1|CA|G|1157
Current chains
- Chain CA
- 23S rRNA
Nearby chains
- Chain C0
- 50S ribosomal protein uL30
- Chain CB
- 5S ribosomal RNA; 5S rRNA
- Chain CR
- 50S ribosomal protein bL20
- Chain CS
- 50S ribosomal protein bL21
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