IL_6UZ7_030

3D structure

PDB id

6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

K.lactis 80S ribosome with p/PE tRNA and eIF5B

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUAAAA*UC

Length

9 nucleotides

Bulged bases

6UZ7|1|2|A|618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_6UZ7_030 not in the Motif Atlas

Homologous match to IL_4V88_416

Geometric discrepancy: 0.1418

The information below is about IL_4V88_416

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.3

Basepair signature

cWW-L-cWW-R-L-R

Number of instances in this motif group

5

Unit IDs

6UZ7|1|2|G|615
6UZ7|1|2|U|616
6UZ7|1|2|U|617
6UZ7|1|2|A|618
6UZ7|1|2|A|619
6UZ7|1|2|A|620
6UZ7|1|2|A|621
*
6UZ7|1|2|U|1103
6UZ7|1|2|C|1104

Current chains

Chain 2

18S ribosomal RNA

Nearby chains

Chain C

KLLA0F09812p

Chain X

RPS23

Chain a

40S ribosomal protein S26