IL_6UZ7_098
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAUGUGG*UGUUAUAGC
- Length
- 17 nucleotides
- Bulged bases
- 6UZ7|1|5|U|505, 6UZ7|1|5|U|531
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_098 not in the Motif Atlas
- Homologous match to IL_5TBW_020
- Geometric discrepancy: 0.188
- The information below is about IL_5TBW_020
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07703.1
- Basepair signature
- cWW-tSH-cSH-tWH-cSH-cHW-cWH-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
6UZ7|1|5|G|502
6UZ7|1|5|A|503
6UZ7|1|5|A|504
6UZ7|1|5|U|505
6UZ7|1|5|G|506
6UZ7|1|5|U|507
6UZ7|1|5|G|508
6UZ7|1|5|G|509
*
6UZ7|1|5|U|526
6UZ7|1|5|G|527
6UZ7|1|5|U|528
6UZ7|1|5|U|529
6UZ7|1|5|A|530
6UZ7|1|5|U|531
6UZ7|1|5|A|532
6UZ7|1|5|G|533
6UZ7|1|5|C|534
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AM
- KLLA0B13409p
- Chain AS
- 60S ribosomal protein L20
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