IL_6UZ7_106
3D structure
- PDB id
- 6UZ7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- K.lactis 80S ribosome with p/PE tRNA and eIF5B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAAG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 6UZ7|1|5|A|904, 6UZ7|1|5|G|908
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_6UZ7_106 not in the Motif Atlas
- Geometric match to IL_5TBW_028
- Geometric discrepancy: 0.1193
- The information below is about IL_5TBW_028
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.7
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
6UZ7|1|5|G|776
6UZ7|1|5|A|777
6UZ7|1|5|A|778
6UZ7|1|5|A|779
6UZ7|1|5|G|780
*
6UZ7|1|5|C|902
6UZ7|1|5|U|903
6UZ7|1|5|A|904
6UZ7|1|5|G|905
6UZ7|1|5|U|906
6UZ7|1|5|A|907
6UZ7|1|5|G|908
6UZ7|1|5|C|909
Current chains
- Chain 5
- 25S ribosomal RNA
Nearby chains
- Chain AC
- KLLA0B07139p
- Chain AL
- 60S ribosomal protein L13
- Chain AN
- Ribosomal protein L15
- Chain Ba
- RPL28
- Chain Bj
- Ribosomal protein L37
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